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Hou, Y. and Lin, S. 2009. Distinct gene number-genome size relationships for eukaryotes and non-eukaryotes: gene content estimation for dinoflagellate genomes. PLoS ONE 4(9): e6978. doi 10.1371/journal.pone.0006978.
Zhang, H., Campbell, D. A., Strum, N. R. and Lin, S. 2009. Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements. Mol. Biol. Evol. 26: 1757-1771.
Lin, S., Zhang, H., Hou, Y., Zhuang, Y. and Miranda, L. 2009. High-level diversity of dinoflagellates in the natural environment, revealed by assessment of mitochondrial cox1 and cob for dinoflagellate DNA barcoding. Appl. Environ. Microbiol. 75: 1279-1290.
Lin, S., Sandh, G., Zhang, H., Cheng, J., Perkins, K., Carpenter, E. J. and Bergman, B. 2009. Two flavodoxin genes in Trichodesmium (Oscillatoriales, Cyanophyceae): remarkable sequence divergence and possible functional diversification. J. Exp. Mar. Biol. Ecol. 371: 93-101.
Lin, S., Zhang, H. and Gray, M. W. 2008. RNA editing in dinoflagellates and its implications for the evolutionary history of the editing machinery. In: H. Smith (ed.), RNA and DNA editing: Molecular Mechanisms and Their Integration into Biological Systems. John Wiley & Sons, Inc. p280-309.
Zhang, H., Litaker, W., Vandersea, M. W., Tester, P. and Lin, S. 2008. Geographic distribution of Karlodinium veneficum in the US east coast as detected by dual-gene Real-Time PCR assay. J. Plankton Res. 30: 905-922.
Zhang, H., Hou, Y., Miranda, L., Campbell, D. A., Sturm, N. R., Gaasterland, T. and Lin, S. 2007. Spliced leader RNA trans-splicing in dinoflagellates. Proc. Natl. Acad. Sci. USA 104: 4618-4623.
Zhang, H., Bhattacharya, D. and Lin, S. 2007. A three-gene dinoflagellate phylogeny suggests monophyly of Prorocentrales and a basal position for Amphidinium and Heterocapsa J. Mol. Evol. 65: 463-474.
Lin, S., Zhang, H., Hou, Y., Miranda, L. and Bhattacharya, D. 2006. Development of a dinoflagellate-oriented PCR primer set leads to the detection of picoplanktonic dinoflagellates from Long Island Sound. Appl. Environ. Micribiol. 72: 5626-5630.
Zhang, H. Bhattacharya, D. and Lin, S. 2005. Phylogeny of Dinoflagellates Based on Mitochondrial Cytochrome b and Nuclear Small Subunit rDNA Sequence Comparisons. J. Phycol. 41: 411-420.
Lin, S., Zhang, H., Spencer, D., Norman, J. and Gray, M. W. 2002. Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates. J. Mol. Biol. 320:727-739.
Zhang, H. and Lin, S. 2002. Detection and quantification of Pfiesteria piscicida by using the mitochondrial cytochrome b gene. Appl. Environ. Microbiol. 68: 989-994.
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